\documentclass[reqno]{amsart}
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\AtBeginDocument{{\noindent\small
Sixth Mississippi State Conference on Differential Equations and
Computational Simulations,
{\em Electronic Journal of Differential Equations},
Conference 15 (2007),  pp. 387--397.\newline
ISSN: 1072-6691. URL: http://ejde.math.txstate.edu or http://ejde.math.unt.edu
\newline ftp ejde.math.txstate.edu  (login: ftp)}
\thanks{\copyright 2007 Texas State University - San Marcos.}
\vspace{9mm}}

\begin{document} \setcounter{page}{387}
\title[\hfilneg EJDE-2006/Conf/15\hfil Prion Proliferation]
{Prion proliferation with unbounded polymerization rates}

\author[C. Walker\hfil EJDE/Conf/15 \hfilneg]
{Christoph Walker}

\address{Christoph Walker \newline
 Vanderbilt University\\
 Department of Mathematics\\
Nashville, TN 37240, USA}
\email{christoph.walker@vanderbilt.edu}

\thanks{Published February 28, 2007.}
\subjclass[2000]{35L45, 35B35, 35B40}
\keywords{Global existence; classical and weak solutions; \hfill\break\indent
 asymptotic behavior; fragmentation; prion proliferation}

\begin{abstract}
 A model for prion replication is studied. We prove global
 existence of weak solutions for unbounded polymerization and
 degradation rates. For bounded degradation rates, the solutions
 are shown to be classical.
\end{abstract}

\maketitle
\numberwithin{equation}{section}
\newtheorem{theorem}{Theorem}[section]
\newtheorem{lemma}[theorem]{Lemma}
\newtheorem{definition}[theorem]{Definition}

\section{Introduction}

 Prions are widely regarded as the infectious agent
causing fatal diseases known as TSE's including BSE of cattle,
Creutzfeld-Jakob and Kuru of human, and Scrapie of sheep. Despite
apparently lacking DNA  and RNA, prions seem to be capable of
proliferation. The probably by now leading theory for replication
is called {\it nucleated polymerization}, according to which the
infectious prions are thought to be a polymer form, called
$PrP^{Sc}$, of a normal protein $PrP^{C}$. This polymer form can
build bonds involving several thousands of monomer units by
attaching non-infectious $PrP^{C}$ monomers and converting them to
the infectious form. Prions are very stable but, nevertheless, can
split into smaller polymers. Usually, this produces again two
infectious $PrP^{Sc}$ polymers. However, if at least one part
falls below a critical size $y_0>0$, it is assumed that this part
instantaneously degenerates into $PrP^{C}$ monomers. We refer to
\cite{Glenn,Masel,Nowak,Prusiner} and the references therein for
more detailed information about the biological background and, in
particular, for the mechanism of nucleated polymerization.

 Here we consider a mathematical model for nucleated
polymerization that has recently been introduced in \cite{Glenn}.
According to this model, the biological processes of coagulation
and splitting can be described by a coupled system consisting of
an ordinary differential equation for the number of $PrP^{C}$
monomers $v(t)\ge 0$ and a partial differential equation for the
density distribution function $u(t,y)\ge 0$ for $PrP^{Sc}$
polymers of size $y>y_0$. The equations read as
    \begin{equation}\label{1}
        \dot{v} =  \lambda - \gamma  v -
        v\int_{y_0}^\infty\tau(y)
        u(t,y)  \,\mathrm{d} y  +  2\int_{y_0}^\infty u(t,y)  \beta(y) \int_0^{y_0}
        y'  \kappa(y',y)  \,\mathrm{d} y' \,\mathrm{d} y
    \end{equation}
and
    \begin{equation}\label{2}
        \dot{u} +  v(t) \partial_y\big(\tau(y) u(y)\big)=
         -\big(\mu(y)+\beta(y)\big)
        u(y) +  2\int_y^\infty \beta(y')  \kappa(y,y')  u(y')  \,\mathrm{d} y'\
    \end{equation}
for $y\in Y:=(y_0,\infty)$, which are supplemented with the
initial conditions
    \begin{equation}\label{3}
        v(0) =  v^0\,,\quad u(0,y) = u^0(y)\,,\quad y\in Y\,,
    \end{equation}
and the boundary condition
    \begin{equation}\label{4}
        u(t,y_0)  =  0\,,\quad t>0\,.
    \end{equation}
The right hand side of the linear ode for $v$ takes into account
that, on the one hand, the number of monomers is increased by a
constant background source $\lambda$ or if a $PrP^{Sc}$ polymer of
any size $y>y_0$ decays at a rate $\beta(y)$ into at least one
daughter polymer of size $y'\le y_0$, which is assumed to
degenerate immediately into monomers. The probability (density)
for this event is denoted by $\kappa(y',y)$. On the other hand,
the number of $PrP^{C}$ monomers decreases by metabolic
degradation, which is accounted for by the term $-\gamma v$, and
if any monomer is attached to a
$PrP^{Sc}$ polymer of size $y>y_0$ at a rate $\tau(y)$.

 The pde for $u$ involves a transport term
$v(t)\partial_y(\tau(y) u(y))$ on the left hand side due to
polymerization, while the right hand side reflects that polymers
of size $y>y_0$ either disappear by metabolic degradation with
rate $\mu(y)$ or by splitting with rate $\beta(y)$, or that they
can be produced as the result of the decay of
a larger polymer.

 The equations above have been investigated in \cite{Pruess-Webb},
\cite{Glenn}, \cite{Pruess-Zacher} assuming
that the kernels have the particular form
 \begin{equation}\label{5}
     \tau \equiv \text{const}\,,\quad  \mu \equiv \text{const}\,,\quad
\beta(y) =      \beta  y\,,\quad \kappa(y',y)  = \frac{1}{y}\,.
    \end{equation}
If $U(t)$ denotes the number of all $PrP^{Sc}$ polymers and $P(t)$
the number of all $PrP^{C}$ monomers forming those polymers, that
is, if
$$
 U(t):=\int_Y u(t,y)  \,\mathrm{d} y\,,\quad P(t):=\int_Y y
u(t,y)  \,\mathrm{d} y\,,
$$
we notice that \eqref{5} leads to the closed system of ode's
\begin{align}
    \dot{v} & = \lambda -\gamma  v-\tau  v U +  \beta  y_0^2 U\,,\label{4a}\\
    \dot{U} & = \beta  P - \mu  U - 2 \beta  y_0  U\,,\label{4b}\\
    \dot{P} & = \tau  v U - \mu  P - \beta  y_0^2  U\,,\label{4c}
    \end{align}
which is uniquely globally solvable. Thus, in this case, \eqref{1}
and \eqref{2} are no longer coupled since $v(t)$ is known for all
times $t\ge 0$. Moreover, as observed in \cite{Glenn}, there
exists a disease-free steady state and a disease steady state for
the ode-problem \eqref{4a}-\eqref{4c} and the original pde-problem
\eqref{1}, \eqref{2} as well. We point out that in the general
case, that is, if the kernels are not exactly of the form
\eqref{5}, existence of a non-trivial (disease) steady state is
not known so far.

 In \cite{Glenn} the asymptotic behavior of the ode
system \eqref{4a}-\eqref{4c} is investigated assuming \eqref{5}.
In particular, global stability of the disease-free steady state
and local stability of the disease steady state is shown depending
on the involved parameters. The result concerning the non-trivial
steady state has subsequently been improved in
\cite{Pruess-Zacher} to global stability. Using the method of
characteristics combined with semigroup theory, equation \eqref{2}
with data as in \eqref{5} has been solved in \cite{Pruess-Webb}.
In addition, it is shown that the solution converges towards the
disease-free or the disease steady state depending on whether or
not there holds
    \begin{equation}\label{w}
         y_0\beta +\mu>\displaystyle
        \sqrt{\lambda\beta\tau/\gamma}\,.
    \end{equation}


 Recently, equations \eqref{1}-\eqref{4} have been
studied in \cite{SW} without assuming \eqref{5}. There existence
and uniqueness of global classical solutions is shown provided the
polymerization rate $\tau$ is independent of polymer size, the
degradation rates $\mu$ and $\beta$ are arbitrary bounded
functions, and the probability density satisfies the natural
constraints
 \begin{equation}\label{86}
        \kappa(y',y)=\kappa(y-y',y)\,,\quad y>y_0\,,\; 0<y'<y\,,
    \end{equation}
meaning binary splitting of polymers, and
    \begin{equation}\label{88}
        \int_0^y \kappa(y',y)  \,\mathrm{d} y' = 1\,,\quad  y>y_0\,.
    \end{equation}
Let us point out here that \eqref{86} and \eqref{88} imply
$$
 2 \int_0^y y'  \kappa(y',y)  \,\mathrm{d} y' = y\,,\quad  y>y_0\,,
 $$
i.e. splitting conserves the number of monomers.\\
In \cite{SW} also
global weak solutions have been shown to exist for $\mu$ and
$\beta$ unbounded. In both situations it has been proved that the
disease-free steady state
$(v,u)=(\lambda/\gamma,0)$ is globally asymptotically stable
under some additional growth assumptions.

 The novelty of this paper is to take into consideration
non-constant, even unbounded polymerization rates $\tau$. The
mathematically convenient assumption of constant polymerization
rate is often explained biologically by the linear appearance of
scrapie-associated $PrP^{Sc}$ polymers when observed using an
electron microscope. Obviously, the model becomes mathematically
more tractable when assuming a constant polymerization rate
\cite{Masel,Nowak}. However, as pointed out in \cite{Masel},
assuming $\tau$ constant is plausible for linear polymers, but not
for globular aggregates since the polymers may have another
geometry on other levels. Therefore, our aim is to establish
existence for the equations involving a
varying polymerization rate $\tau$.

 In the next section 2, we state our main results. The
first statement is about the existence and uniqueness of classical
solutions, whose proof is sketched in section 3. Based on this
result, we then show in section 4 how we can obtain existence of
weak solutions using a compactness argument. Finally, section 5 is
dedicated to the proof of asymptotical stability of the
disease-free steady state.

\section{Main Results}

 Clearly, the positive cone $L_1^+$ of $L_1:=L_1(Y,y\,\mathrm{d}
y)$ is a reasonable state space for the population density $u$,
since it allows to account for the biologically important
quantities of all $PrP^{Sc}$ polymers and all $PrP^{C}$ monomers
forming those
polymers, respectively.

 For $\mu$ and $\beta$ bounded we can proof the existence
and uniqueness of global classical solutions that propagate with
finite speed.

\begin{theorem}\label{T5}
Suppose that $\mu, \beta\in L_\infty^+(Y)$, that $\kappa$ is a
non-negative measurable function satisfying \eqref{86}, \eqref{88}
and that
    \begin{equation}\label{tauu}
\tau\in C^1([y_0,\infty))\quad \text{with}\quad 0<\tau(y)\le
\tau^\ast    y\,,\; y\ge y_0\,.
    \end{equation}
Then, given any $v^0>0$ and any $u^0\in L_1^+$ with
$\partial_y(\tau u^0)\in L_1$ and $u^0(y_0)=0$, there exists a
unique global classical solution $(v,u)$ to \eqref{1}-\eqref{4}
such that $v\in C^1(\mathbb{R}^+)$, $v(t)>0$ for $t\ge 0$, and $u\in
C^1(\mathbb{R}^+,L_1)$ with $\partial_y(\tau u)\in C(\mathbb{R}^+,L_1)$
and $u(t)\in L_1^+$ for $t\ge 0$.

 In addition, if $\tau'$ is bounded and $\mathop{\rm supp}
u^0\subset [y_0,S_0]$ for some $S_0>y_0$, then also
$\mathop{\rm supp} u(t)\subset [y_0,S(t)]$, $t\ge 0$, where $S$ is the
global solution to $\dot{S}= v\tau(S)$, $t>0$, with $S(0)=S_0$.
\end{theorem}

 From a biological point of view, the assumption of a
bounded splitting rate $\beta$ does not seem to be appropriate. We
therefore would like to weaken the assumptions on $\beta$ and
$\mu$ to also allow for unbounded degradation rates. To do so we
introduce the notion of weak solutions.

 In the following we mean by $L_{1,\sf{w}}(Y)$ the space
$L_1(Y):=L_1(Y,\,\mathrm{d} y)$ equipped with its weak topology. Moreover,
we denote by
$$
Q[u](y)  :=   -\big(\mu(y)+\beta(y)\big)
        u(y) +  2\int_y^\infty \beta(y')  \kappa(y,y')  u(y')  \,\mathrm{d}
        y'\,, \quad\text{a.e. } y\in Y\,,
$$
the right hand side of \eqref{2}.

\begin{definition}\label{dddd} \rm
Given $v^0>0$ and $u^0\in L_1^+$, we call $(v,u)$ a {\it global
weak solution} to \eqref{1}-\eqref{4} if
    \begin{itemize}
\item[(i)] $v\in C^1(\mathbb{R}^+)$ is a non-negative solution to
        \eqref{1},
\item[(ii)] $u\in C(\mathbb{R}^+, L_{1,\sf{w}}(Y))\cap L_{\infty,
            loc}(\mathbb{R}^+, L_1^+)$,
\item[(iii)] for all $t>0$ and
        $\varphi\in W_\infty^1(Y)$ there holds $Q[u]\in L_1((0,t)\times
        Y)$ and
    \begin{align*}
& \int_{y_0}^\infty \varphi(y)  u(t,y)  \,\mathrm{d} y
  - \int_0^t v(s)  \int_{y_0}^\infty \varphi' (y) \tau(y) u(s,y) \,\mathrm{d} y  \,\mathrm{d} s\\
& =\int_{y_0}^\infty \varphi(y)  u^0(y)  \,\mathrm{d} y
  + \int_0^t \int_{y_0}^\infty \varphi(y)  Q[u(s)](y)  \,\mathrm{d} y  \,\mathrm{d} s \,.
 \end{align*}
    \end{itemize}
    \end{definition}

 We point out that for a weak solution $(v,u)$ the function $u$
{\it a priori} is time continuous merely in the weak topology of $L_1(Y)$.
But arguments similar to \cite[sect. II.1, II.2]{DPL} show that
$u$ actually belongs to $C(\mathbb{R}^+,L_1(Y))$ provided that $\tau$
 satisfies \eqref{tauu} and has a bounded derivative.

 To prove existence of weak solutions in the sense of
Definition \ref{dddd} we assume that:
There exists $\alpha \ge 1$ and $\varrho\in  L_\infty^+(Y)$ such that
    \begin{equation}\label{40}
 \text{$\varrho(y)\to 0$ as $y\to \infty$ and
     $\mu(y)+\beta(y) \le \varrho(y)y^\alpha$, a.e. $y\in Y$}\,.
    \end{equation}
Furthermore, we require that $\kappa$ satisfy \eqref{86},
\eqref{88} and the following technical condition: Given $R>y_0$
and $\varepsilon >0$ there exists $\delta>0$ such that
    \begin{equation}\label{41}
\sup_{\mathcal{E}\subset (y_0,R),\; \vert\mathcal{E} \vert\le
\delta}\,
   \operatorname*{ess-sup}_{y\in Y}  \frac{\beta(y)}{y^\alpha}
 \int_{y_0}^y {\bf 1}_{\mathcal{E}} (y')  \kappa(y', y)   \,\mathrm{d} y'  \le
    \varepsilon\,,
   \end{equation}
where ${\bf 1}_{\mathcal{E}}$ denotes the indicator function of a
measurable set $\mathcal{E}\subset Y$ and $\vert \mathcal{E}\vert$
is the Lebesgue measure of $\mathcal{E}$. We suppose that the
polymerization rate $\tau$ satisfies \eqref{tauu} and that, in the
case $\alpha=1$,
    \begin{equation}\label{t2}
    \tau(y)\le \varrho(y) y \,,\quad \text{a.e.}\ y\in Y\,.
    \end{equation}

 Based on Theorem \ref{T5} we can prove existence of weak
solutions employing a compactness argument.

\begin{theorem}\label{T22}
Suppose \eqref{40}-\eqref{41} and \eqref{tauu} with \eqref{t2} if
$\alpha=1$. Given any $v^0>0$ and any $u^0\in L_1^+(Y,y^\alpha\,\mathrm{d}
y)$, problem \eqref{1}-\eqref{4} admits at least one global weak
solution $(v,u)$. Moreover, $u$ belongs to
$L_{\infty,loc}(\mathbb{R}^+,L_1(Y,y^\alpha \,\mathrm{d} y))$.

 In addition, if $\tau'$ is bounded and $\mathop{\rm supp}
u^0\subset [y_0,S_0]$ for some $S_0>y_0$, then also
$\mathop{\rm supp} u(t)\subset [y_0,S(t)]$, $t\ge 0$, where $S$ is the
global solution to $\dot{S}= v\tau(S)$, $t>0$, with $S(0)=S_0$.
\end{theorem}

To conclude, we mention the analogue to the stability
result of \cite{SW} for the disease-free steady state
$(v,u)=(\lambda/\gamma, 0)$. For this purpose, we suppose that
either
    \begin{equation}\label{Aa}
\begin{gathered}
\mu, \beta\in L_\infty^+(Y)\quad \text{and}\\
    v^0>0\,,\; u^0\in L_1^+ \text{ with } \partial_y(\tau u^0)\in L_1
    \text{ and } u^0(y_0)=0\,,
    \end{gathered}
    \end{equation}
or
    \begin{equation}\label{Bb}
\text{\eqref{40},  \eqref{41} hold and }
     v^0>0\,,\; u^0\in L_1^+(Y,y^\alpha \,\mathrm{d} y)\,.
    \end{equation}
Furthermore, in both cases we assume that $\tau\in C^1([y_0,\infty))$ with
    \begin{equation}\label{oo}
        0<\tau_\ast\le \tau(y)\le \tau^\ast<\infty\,,\quad
    y\in Y\,,
    \end{equation}
and that
$$
 d_0:=\operatorname*{ess-sup}_{y\in Y} \frac{\beta(y)}{y
 \mu(y)}\in (0,\infty)\,.
$$
We then introduce constants $\varepsilon_k, \delta_k$
such that
$$
0\le \delta_k\le \beta(y)\int_0^{y_0} (y')^k  \kappa(y',y)  \,\mathrm{d}
y'  \le  \varepsilon_k \,,\quad\text{a.e. } y\in Y\,,
$$
for $k=0,1$, assuming at least $\varepsilon_1<\infty$. We suppose
that $\min\{\underline{\mu},\delta_0\}>0$, where
$$
\underline{\mu}  :=  \operatorname*{ess-inf}_{y\in Y} \mu(y)\,,
$$
and that
     \begin{equation}\label{65}
    \frac{1}{2d_0}  (\underline{\mu}  +  2  \delta_0)  >  \frac{
    \lambda(\tau^\ast)^2}{2\gamma\tau_\ast}  +  \frac{\varepsilon_1\tau^\ast}{\tau_\ast}   -  2  \delta_1  +
    \frac{2d_0 \delta_1
    \big(\varepsilon_1\tau^\ast/\tau_\ast-\delta_1\big)}{\underline{\mu}+2\delta_0} \,.
    \end{equation}

As the next theorem shows, the disease-free steady state is then
globally asymptotically stable.


\begin{theorem}\label{T3}
Suppose \eqref{86}, \eqref{88}, \eqref{oo} and \eqref{Aa} or
\eqref{Bb}. Moreover, let \eqref{65} be satisfied. Denote by $(v,u)$
either the classical solution
provided by Theorem \ref{T5} if \eqref{Aa} holds, or the weak
solution provided by Theorem \ref{T22} if \eqref{Bb} holds.
Then, for each $\varepsilon>0$ there is $\delta>0$ such that
$$
\vert v(t)-\lambda/\gamma\vert   +  \| u(t)\|_{L_1}  \le
\varepsilon\,,\quad t\ge 0\,,
$$
whenever
$$
\vert v^0-\lambda/\gamma\vert   +  \| u^0\|_{L_1}  \le
\delta\,.
$$
If, in addition, $\beta(y)\le B y$ for a.e. $y\in Y$ and some
$B>0$, then
$$
\big( v(t),u(t)\big)\longrightarrow (\lambda/ \gamma, 0) \quad
\text{in}\quad \mathbb{R} \times L_1(Y,y^\sigma\,\mathrm{d} y)\quad \text{as}\quad
t\longrightarrow \infty
$$
for each $\sigma<1$.
\end{theorem}

 We point out that the assumptions of Theorem \ref{T3}
are equivalent to \eqref{w} in the case that the data are as in
\eqref{5}. Indeed, in this case we may take $d_0=\beta/\mu$, $\delta_0:=\beta y_0$ and $\varepsilon_1:=\delta_1:=\beta
y_0^2/2$.

\section{Proof of Theorem \ref{T5}}

 We merely give a sketch of the proof of Theorem \ref{T5}
since the argumentation follows closely the lines of
\cite[Thm.3.1]{SW}. Define a diffeomorphism $\Phi :Y\to
(0,\infty)$ by virtue of
    \begin{equation}\label{6a}
    \Phi (y):=\int_{y_0}^y \frac{\,\mathrm{d}
    y'}{\tau(y')}\,,\quad y \in Y\,,
    \end{equation}
and observe that
$$
    \Phi^{-1}\big(\Phi(y)+t\big)  \le   y  e^{t\tau^\ast }\,,\quad
y>y_0\,,\; t\ge 0\,,
$$
due to \eqref{tauu}. Given $f\in L_1$ we set
$$
\big(W(t)f\big) (y):= {\bf{1}}_{[t,\infty)}\big(\Phi(y)\big)
\frac{\tau\big(\Phi^{-1}(\Phi(y)-t)\big)}{\tau(y)}
f\big(\Phi^{-1}(\Phi(y)-t) \big)\,,\quad y\in Y\,,\; t\ge 0\,.
$$
It is not difficult to check that $\{W(t)  ;  t\ge 0\}$ is a
strongly continuous positive semigroup on $L_1$ satisfying
$$
\|W(t)\|_{\mathcal{L}(L_1)}\le e^{\tau^\ast t}\,,\quad t\ge 0\,.
$$
For the corresponding generator $-A$ there holds
$$
    Au  =  \partial_y(\tau u)\,,\quad u\in D(A)= \{ f\in
   L_1  ;  \partial_y(\tau f)\in L_1  ,  f(y_0)=0\}\,.
$$
Recall then that $Q$ is a bounded and linear operator on $L_1$ due
to $\mu, \beta\in L_\infty (Y)$. Therefore, given $T>0$, $R>1$ and
defining $ \mathbb{A}_v(t):= v(t)A - Q$ for
$$
v\in\mathcal{V}_{T,R}:=\big\{ v\in C^1([0,T])  ;
        R^{-1}\le v(t)\le \|v\|_{C^1([0,T])}\le R\big\}\,,
$$
it follows from \cite[$\S$5.2]{Pazy} that
$\big(-\mathbb{A}_v(t)\big)_{t\in [0,T]}$ generates a unique evolution
system $U_v(t,s)$, $0\le s\le t\le T$, in $L_1$ with
\begin{equation}\label{21s}
       \|U_v(t,s)\|_{\mathcal{L}(L_1)} \le e^{\omega(t-s)}\,,\quad
0\le s\le t\le  T\,,\; v\in\mathcal{V}_{T,R}\,,
    \end{equation}
for some $\omega:=\omega(T,R)>0$. Moreover, following the lines of
the proof of \cite[Thm.5.4.6]{Pazy} we infer that the
differentiability of $v\in\mathcal{V}_{T,R}$ ensures that
$U_v(t,s)$ maps $D(A)$ continuously into itself and we may assume
that
     \begin{equation}\label{21bs}
 \|U_v(t,s)\|_{\mathcal{L}(D(A))}\le \omega\,,\quad 0\le s\le t\le
       T\,, \quad v\in\mathcal{V}_{T,R}\,.
    \end{equation}
In addition, for $0\le s\le t\le T$ and $v, w\in
\mathcal{V}_{T,R}$, we have
    \begin{equation}\label{21cs}
       \|U_v(t,s)-U_w(t,s)\|_{\mathcal{L}(D(A),L_1)}\le
       \omega (t-s) \|v-w\|_{C([0,T])}\,.
   \end{equation}
For details we refer to the proof of \cite[Prop.2.2]{SW}.
 We choose $T>0$ and $S^{-1}>0$ sufficiently small and we
denote by $v_{\bar{u}}\in C^1([0,T])$ the unique solution to
\eqref{1} with $u$ replaced by
$$
\bar{u}\in X_T := \big\{ w\in C([0,T],L_1^+)  ;
\|w(t)\|_{L_1} \le S  ,  t\in [0,T]\big\} \,.
$$
There exists $R:=R(S)>1$ such that $v_{{\bar{u}}}\in
\mathcal{V}_{T,R}$ whenever ${\bar{u}}\in X_T$. We then observe
that, since $u^0\in D(A)$,
$$
\Lambda (\bar{u})(t)  :=
U_{v_{\bar{u}}}(t,0)  u^0\,,\quad t\in [0,T]\,,\; \bar{u}\in X_T\,,
$$
defines the unique solution in $C([0,T],D(A))\cap C^1([0,T],L_1)$
to the problem
$$
    \dot{u}  +  \mathbb{A}_{v_{\bar{u}}}(t)  u  =  0\,,\quad
    t\in [0,T]\,,\quad u(0)  =  u^0\,.
$$
Furthermore, \eqref{21s}-\eqref{21cs} ensure that $\Lambda:
X_T\to X_T$ is a contraction and hence has a fixed point.
This proves existence and uniqueness of a maximal solution $(v,u)$
to \eqref{1}-\eqref{4} on an interval $J$ with properties as
stated in Theorem \ref{T5}. As in the proof of \cite[Thm.3.1]{SW}
the identity
    \begin{equation}\label{iden}
\dot{v}(t)  +  \frac{\,\mathrm{d}}{\,\mathrm{d} t}\int_{y_0}^\infty y  u(t,y)\,\mathrm{d} y
        =  \lambda   -  \gamma  v(t)  -  \int_{y_0}^\infty y  \mu(y)  u(t,y)\,\mathrm{d}
        y\,,\quad t\in J\,,
    \end{equation}
and \eqref{1} warrant the existence of $R>1$ such that
$R^{-1}\le v(t)\le \|v\|_{C^1(J)}\le R$ for $t\in J$.
According to \eqref{21bs} this implies
$$
\|U_v(t,s)\|_{\mathcal{L}(D(A))}\le c(J)\,,\quad 0 \le s\le t \in
J\,,
$$
whence $J=\mathbb{R}^+$ since $\|u(t)\|_{D(A)}$ remains bounded (see the
proof of \cite[Thm.3.1]{SW}).

 To prove finite speed of propagation we first recall that
$\dot{S}=v\tau(S)$, $t>0$, $S(0)=S_0$ has, thanks to \cite[Satz 5.1]{GDgl},
a global solution given by
$$
S(t)  =  \phi^{-1}\Big( \int_0^t v(s)  \,\mathrm{d} s\Big)\,,\quad
\text{where}\quad \phi(y)  :=  \int_{S_0}^y \frac{\,\mathrm{d} z}{\tau(z)}\,.
$$
Next, we define
\mbox{$P\in C^1(\mathbb{R}^+, L_1(Y))$} by
$$
P(t,y):= \int_y^\infty u(t,y')  \,\mathrm{d} y'\,,\quad y\in Y\,,\; t\ge 0\,,
$$
and notice that \eqref{2} implies
    \begin{align*}
    \frac{\,\mathrm{d}}{\,\mathrm{d} t} \int_{S(t)}^\infty P(t,y)  \,\mathrm{d} y
 & = v(t) \tau\big(S(t)\big)  P\big(t,S(t)\big)
   +  v(t)\int_{S(t)}^\infty \tau'(y)  P(t,y) \,\mathrm{d} y\\
 &\quad -  \dot{S}(t)  P\big(t,S(t)\big)
    +  \int_{S(t)}^\infty \int_y^\infty Q[u(s)](y')\,\mathrm{d} y'  \,\mathrm{d} y\\
 &\le  \|\tau'\|_\infty  v(t) \int_{S(t)}^\infty P(t,y) \,\mathrm{d} y
   +  \|\beta\|_\infty \int_{S(t)}^\infty P(t,y)\,\mathrm{d} y\,.
    \end{align*}
Owing to
$$
\int_{S(0)}^\infty P(0,y)\,\mathrm{d} y  =  0
$$
we infer
$$\int_{S(t)}^\infty P(t,y)  \,\mathrm{d} y=0\,,\quad t\ge 0\,.
$$
This completes the proof of Theorem \ref{T5}.

\section{Proof of Theorem \ref{T22}}


 To prove Theorem \ref{T22} we need the
following auxiliary result. As in section 3 we use the notation
$-A=-\partial_y(\tau\cdot)$ and denote by $W(t)$, $t\ge 0$, the
corresponding semigroup on $L_1(Y)$.

\begin{lemma}\label{L4}
Suppose $\tau$ satisfies \eqref{tauu} and, given
$v\in C([0,T],\mathbb{R}^+)$, let
$U_{A_v}(t,s)$, $0\le s\le t\le T$, denote the unique evolution
system in $L_1(Y)$ for
$$
-A_v(t):=-v(t)A\,,\quad 0\le t\le T\,.
$$
For $M>y_0$ and $\delta>0$, put
$$
\lambda_M(\delta):= \tau^\ast  M \sup_{\mathcal{E}\subset
(y_0,M),\; \vert \mathcal{E}\vert\le \delta} \, \int_{\mathcal{E}}
\frac{\,\mathrm{d} z}{\tau(z)}\,.
$$
Then there holds
$$
\sup_{\mathcal{E}\subset (y_0,M),\; \vert \mathcal{E}\vert\le
\delta} \, \int_{\mathcal{E}} U_{A_v}(t,s) f\,\mathrm{d} y  \le
\sup_{\mathcal{F}\subset (y_0,M),\; \vert \mathcal{F}\vert\le
\lambda_M(\delta)}\, \int_{\mathcal{F}}  f\,\mathrm{d} y
$$
for any $f\in L_1^+(Y)$ and $0\le s\le t\le T$.
\end{lemma}


\begin{proof}
Given any measurable subset $\mathcal{E}$ of $(y_0,M)$ and any
$f\in L_1(Y)$ we notice that
\begin{align*}
\int_{\mathcal{E}} W(t) f  \,\mathrm{d} y&= \int_{\Phi^{-1}(t)}^\infty {\bf
1}_{\mathcal{E}} (y)
\frac{\tau\big(\Phi^{-1}(\Phi(y)-t)\big)}{\tau(y)}
f\big(\Phi^{-1}(\Phi(y)-t) \big)  \,\mathrm{d} y\\
&= \int_{y_0}^\infty {\bf 1}_{\Phi^{-1}((\Phi(\mathcal{E})-t)\cap
(0,\infty))}(y)  f(y)  \,\mathrm{d} y\,,
\end{align*}
with $\Phi$ as in \eqref{6a}. Clearly,
$\Phi^{-1}\big((\Phi(\mathcal{E})-t)\cap (0,\infty)\big) \subset
(y_0,M)$ and thus, due to \eqref{tauu},
$$
\big\vert \Phi^{-1}\big((\Phi(\mathcal{E})-t)\cap
(0,\infty)\big)\big\vert  \le  \lambda_M(\delta)
$$
since the Lebesgue measure is invariant under translations.
Observing that the unique evolution system to
$\big(-A_v(t)\big)_{t\in [0,T]}$ is given by
$$
U_{A_v}(t,s)  =  W\Big(\int_s^t v(r)\,\mathrm{d} r \Big)\,,\quad
0\le s\le t\le T\,,
$$
the assertion follows.
\end{proof}


 Now we turn to the proof of Theorem \ref{T22}. We
rather briefly sketch it and point out the necessary modifications
to \cite[Thm.4.3]{SW}. First, let $u_n^0\in \mathcal{D}^+(Y)$ be
such that $u_n^0\to u^0$ in $L_1(Y,y^\alpha \,\mathrm{d} y)$. Put
$\mu_n:=\min\{\mu , n\}$, $\beta_n:=\min\{\beta , n\}$. We denote
by
$$
(v_n,u_n)\in C(\mathbb{R}^+,\mathbb{R}^+\times D(A))\cap C^1(\mathbb{R}^+, \mathbb{R}\times L_1)
$$
the classical solution to \eqref{1}-\eqref{4} provided by Theorem
\ref{T5}, where $(u^0,\beta,\mu)$ is replaced by
$(u_n^0,\beta_n,\mu_n)$. From the corresponding identity
\eqref{iden} we obtain, for $T>0$ fixed,
    \begin{equation}\label{20}
    v_n(t)+\|u_n(t)\|_{L_1} \le c_0(T)\,,\quad t\in [0,T]\,,\; n\ge 1\,.
    \end{equation}
Moreover, since by \eqref{86} and \eqref{88},
$$
2\int_{y_0}^y (y')^\alpha   \kappa(y',y)  \,\mathrm{d} y'  \le
y^\alpha\,,\quad y>y_0\,,
$$
we infer from \eqref{2} and \eqref{tauu}
\begin{align*}
        \frac{\,\mathrm{d}}{\,\mathrm{d} t} \int_{y_0}^\infty y^\alpha  u_n(t,y)  \,\mathrm{d} y  & \le
          \alpha  v_n(t) \int_{y_0}^\infty y^{\alpha -1}  \tau(y)
          u_n(t,y)  \,\mathrm{d} y\\
        & \le  c(T) \int_{y_0}^\infty y^{\alpha}  u_n(t,y)  \,\mathrm{d}
        y\,,
    \end{align*}
whence \begin{equation}\label{21}
    \|u_n(t)\|_{L_1(Y,y^\alpha\,\mathrm{d} y)} \le c(T)\,,\quad t\in [0,T]\,,
    \; n\ge 1\,,
    \end{equation}
with $c(T)$ being independent of $n$. Using \eqref{40}, \eqref{20}
and \eqref{21} we easily derive from equation \eqref{1} that
$$
\max_{t\in [0,T]}  \vert \dot{v}_n(t)\vert  \le  c(T)\,,\quad
n\ge 1\,.
$$
Therefore, the sequence $(v_n)$ is relatively compact in
$C([0,T])$
due to the Arzel\`a-Ascoli theorem.

We then claim that the set $\{ u_n(t)  ;  n\ge 1  ,  t\in
[0,T]\}$ is relatively compact in $L_{1,\sf{w}}(Y)$. Indeed, from \eqref{20}
it follows
    \begin{equation} \label{23}
    \lim_{R\to \infty}\,  \sup_{n\ge 1,\; t\in [0,T]}\,
  \int_R^\infty u_n(t,y)  \,\mathrm{d} y  =  0\,.
    \end{equation}
Writing the solution $u_n$ in the form
$$
u_n(t)  =  U_{A_{v_n}}(t,0)  u_n^0+\int_0^t
U_{A_{v_n}}(t,s) Q_n[u_n(s)]\,\mathrm{d} s\,,\quad t\in [0,T]\,,
$$
with $U_{A_{v_n}}$ denoting the evolution system corresponding to
$\big(-v_n(t)A\big)_{t\in [0,T]}$, we obtain from Lemma \ref{L4},
for $R>y_0$ and $\delta>0$,
    \begin{align*}
    \int_{\mathcal{E}} u_n(t,y)  \,\mathrm{d} y
    & \le  \int_{\mathcal{E}\cap (y_0,R)} u_n(t,y)  \,\mathrm{d} y  +  \int_{R}^\infty u_n(t,y)  \,\mathrm{d}
    y \\
    &\le  \sup_{\mathcal{F}\subset (y_0,R),\;
                \vert\mathcal{F}\vert\le \lambda_R(\delta)}\,
      \int_{\mathcal{F}} u_n^0(y)  \,\mathrm{d} y \\
    & \quad +  2\int_0^t \sup_{\mathcal{F}\subset (y_0,R),\; \vert\mathcal{F}\vert\le
    \lambda_R(\delta)}\,
     \int_{y_0}^\infty u_n(s,y) \beta_n(y)  \int_{y_0}^y {\bf 1}_{\mathcal{F}}(y')  \kappa(y',y)  \,\mathrm{d} y'  \,\mathrm{d} y  \,\mathrm{d}
     s\\
     & \quad +  \frac{1}{R}   \|u_n(t)\|_{L_1}\,,
    \end{align*}
where $\mathcal{E}$ is any measurable subset of $Y$ with measure
$\vert\mathcal{E}\vert \le \delta$. Hence, \eqref{40}, \eqref{41},
\eqref{21}, and the fact that $\lambda_R(\delta)\to 0$ as
$\delta\to 0^+$ imply
$$
    \lim_{\vert\mathcal{E}\vert\to 0}\,
\sup_{n\ge 1,\; t\in [0,T]}\,  \int_{\mathcal{E}} u_n(t,y)
\,\mathrm{d}  y  =  0\,,
$$
what entails the claimed compactness of $\{ u_n(t)  ;  n\ge 1
,  t\in [0,T]\}$ in $L_{1,\sf{w}}(Y)$ by invoking the Dunford-Pettis theorem
(cf. \cite[Thm.4.21.2]{Edwards}). Next, \eqref{20}-\eqref{23}
guarantee that the set $\{ u_n  ;  n\ge 1 \}$ is equicontinuous
in $L_{1,\sf{w}}(Y)$ at every $t\in [0,T]$ (see the proof of
\cite[Thm.4.3]{SW}). It thus follows from a variant of the
Arzel\`a-Ascoli theorem \cite[Thm.1.3.2]{Vrabie} that we may
extract a subsequence (not relabeled) and \mbox{$(v,u)$} such
that
    \begin{equation}\label{50}
    (v_n,u_n)\to (v,u)\quad \text{in } C(\mathbb{R}^+, \mathbb{R}\times
    L_{1,\sf{w}}(Y))\,.
    \end{equation}
It remains to show that $(v,u)$ is a weak solution to
\eqref{1}-\eqref{4}. But due to \eqref{40}, \eqref{21}, and
\eqref{tauu} combined with \eqref{t2} in the case $\alpha=1$, we
may apply \cite[Lem.4.2]{SW} and see that $(v,u)$ satisfies (iii)
of Definition \ref{dddd}. We also derive from the just cited lemma
that $v$ is continuously
differentiable and solves (i) of  Definition \ref{dddd}.\\
Finally, finite speed of propagation follows from Theorem \ref{T5}
since we may choose the sequence $(u_n^0)\subset \mathcal{D}^+(Y)$
such that $\mathop{\rm supp}  u_n^0\subset [y_0,S_0]$ (see
\cite[Cor.4.4]{SW}). Thus the proof of Theorem \ref{T22} is
complete.

\section{Proof of Theorem \ref{T3}}

 The proof of Theorem \ref{T3} is based on the observation that, as
in the proof of \cite[Lem.5.1]{SW}, condition \eqref{65} ensures the existence of constants $a,b>0$ such that the function
$$
F(v,u):=\Big(v-\frac{\lambda}{\gamma}\Big)^2  +  a
\int_{y_0}^\infty y  u(y)  \,\mathrm{d} y   +  b  \int_{y_0}^\infty
u(y)  \,\mathrm{d} y
$$
defines a Lyapunov function satisfying
    \begin{equation}\label{lll}
        F(v,u)(t)  +  p  \int_0^t\int_{y_0}^\infty u(s,y)  \,\mathrm{d} y  \,\mathrm{d}
        s  \le  F(v^0,u^0)\,,\quad t\ge 0\,,
    \end{equation}
for some $p> 0$. For the classical solution $(v,u)$ this follows directly by
differentiating $F(v,u)$, while for the case of the weak solution
we use inequality \eqref{lll} for the approximating sequence
$(v_n,u_n)$ of the proof of Theorem~\ref{T22} and show that it is
still true in the limit $n\to \infty$. Due to the
definition of $F$, this already proves the stability statement of
Theorem \ref{T3}. If $\beta(y)\le By$, then \eqref{2} and
\eqref{lll} imply
$$
    \| u(t+h)\|_{L_1(Y)}  - \| u(t)\|_{L_1(Y)}  \le   c  h\,,\quad
t  ,  h>0\,,
$$
and
$$
    \int_0^\infty \| u(s)\|_{L_1(Y)}  \,\mathrm{d} s  \le   \frac{1}{p}
    F(v^0,u^0)\,.
$$
Taking into account that
$$
    \|u(t)\|_{L_1}  \le   \frac{1}{a}  F(v^0,u^0)\,,\quad t\ge 0\,,
$$
by \eqref{lll}, we conclude from the above inequalities that
$u(t)\to 0$ in $L_1(Y,y^\sigma\,\mathrm{d} y)$
    as $t\to  \infty$
for each $\sigma<1$. This then also implies $v(t)\to
\lambda/\gamma$ as $t\to  \infty$, hence the statement of
Theorem \ref{T3}.

\subsection*{Acknowledgments}

 I would like to thank Gieri Simonett for reading the manuscript and
offering valuable comments. I also thank Glenn Webb for fruitful discussions.
I am grateful to Philippe Lauren\c{c}ot for pointing out that finite
speed of propagation is true also for unbounded polymerization rates.

\begin{thebibliography}{99}

\bibitem{GDgl} H. Amann.
\textit{Gew\"ohnliche {Differentialgleichungen.}} (de
Gruyter 1995)

\bibitem{DPL} R. J. DiPerna, P. L. Lions.
\textit{Ordinary differential equations, transport theory and Sobolev spaces.} Invent. Math. {\bf 98} (1989), 511-547.

\bibitem{Edwards} R.E. Edwards.
\textit{Functional analysis. {Theory} and
applications}. Dover Publ., New York 1995.

\bibitem{Pruess-Webb} H. Engler, J. Pr\"uss, G. Webb.
\textit{Analysis of a model for the dynamics of prions II.}
J. Math. Anal. Appl. {\bf 324} (2006), 98-117.

\bibitem{Glenn} M. Greer, L. Pujo-Menjouet, G. Webb.
 \textit{A mathematical analysis of the dynamics of prion proliferation.}
To appear in: J. Theor. Biol.

\bibitem{Masel} J. Masel, V. Jansen, M. Nowak.
\textit{Quantifying the kinetic parameters of prion replication.}
Bio. Chem. {\bf 77} (1999), 139-152.

\bibitem{Nowak} M. Nowak, D. Krakauer, A. Klug, R. May.
 \textit{Prion infection dynamics.} Integrative Biology. {\bf 1} (1998), 3-15.

\bibitem{Pazy} A. Pazy.
\textit{Semigroups of linear operators and applications
to partial differential equations.} Springer, Berlin, New York,
Heidelberg 1983.

\bibitem{Pruess-Zacher} J. Pr\"uss, L. Pujo-Menjouet, G. Webb, R. Zacher.
\textit{Analysis of a model for the dynamics of prions.}
 Discrete Contin. Dyn. Syst. Ser. B {\bf 6} (2006), no. 1, 225--235 (electronic).

\bibitem{Prusiner} S. B. Prusiner.
\textit{Novel proteinaceous invectious particles
cause scrapie}. Science {\bf 216} (1986), 136-144.

\bibitem{SW} G. Simonett, C. Walker.
\textit{On the solvability of a mathematical model for prion proliferation.}
J. Math. Anal. Appl. {\bf 324} (2006), 580-603.

\bibitem{Vrabie} I. I. Vrabie.
\textit{Compactness methods for nonlinear evolutions.}
$2^{\rm nd}$ edition. Longman, London 1995.

\end{thebibliography}

\end{document}
